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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911652.1_cds_XP_016461675.1_54980
CDS Infomation

[gene=LOC107784984] [db_xref=GeneID:107784984] [protein=casparian strip membrane protein 2-like] [protein_id=XP_016461675.1] [location=complement(join(77221..77436,78658..78781,79413..79702))] [gbkey=CDS]
Sequence

ATGGATTCAAAATCCCATAGCCATGAAACAGCCATTAACATATCTGAAACAGAGTCCAAC
AAAGGAAAATCTACTGCTGCCACCATTGTAGCTACCACAAAAGCTATTCCTCATAATCAC
AAGGGAGGATGGCTACGAGGGGTTGCCATATTCGACTTTATTCTGCGACTTTGTGGCCTT
GTGGCTGCTCTGGCTGCTGCAACTACCATGGGAACTACTGATGAAACTCTTCCTCTTTTT
ACTCAGTTCTTTCAGTTCGAAGCTAGCTATGATGATCTCCCTGCTTTCTCGTATTTTGTG
GTGGCAAATGCTATTGCAAGTGGATACCTTGTCCTCTCTCTACCTTTCTCCATTGTTTGC
ATTGTTCGACCACATCTTGTTGGAGCTAGACTTCTTCTGTTAATTCTTGACACAGTAATG
GTGGCATTTACCACGGCTGGAGCAGCTGCGGCGGCTGCCATAGTGTACTTAGCAGAAAAC
GGCAACTCCACCACACAATGGCTGGAGATATGCCAGCAGTTCGGCGATTTCTGCCAGCGA
GCGAGCGGCGCCGTCGTGGCTTCTTTCATTGCGGCAGTCATCTTCATCTTCCTTGTCATT
TTCTCTGCCCTGTCTCTCCGAAGACACTAA

Peptide Sequence

PEP ID

XP_016461675.1
PEP Infomation

PREDICTED: casparian strip membrane protein 2-like [Nicotiana tabacum]
Sequence

MDSKSHSHETAINISETESNKGKSTAATIVATTKAIPHNHKGGWLRGVAIFDFILRLCGL
VAALAAATTMGTTDETLPLFTQFFQFEASYDDLPAFSYFVVANAIASGYLVLSLPFSIVC
IVRPHLVGARLLLLILDTVMVAFTTAGAAAAAAIVYLAENGNSTTQWLEICQQFGDFCQR
ASGAVVASFIAAVIFIFLVIFSALSLRRH

Transcript Sequence

Gene sequence data has not been registered.